PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462929290
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bHLH
Protein Properties Length: 236aa    MW: 25799.2 Da    PI: 5.9755
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462929290genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH352.5e-1170117454
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
        HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                ++  rE+ RRd++N++f eL +++ +    ++ Kl+Ka iL  A + + +L
  462929290  70 SKACREKLRRDKLNDRFLELSSVINPG---KQAKLDKANILSDAARMLGQL 117
                6789**********************9...9*************9999887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.7E-1360133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.46866117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.20E-969122No hitNo description
PfamPF000108.7E-970117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.7E-1371139IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-872123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MMHGAGGVGD PVDDFLLADD GDLAIFCDTV PTRAADAGLG IEDDSGDAYG LEQSNLGKRG  60
RDESSSGPKS KACREKLRRD KLNDRFLELS SVINPGKQAK LDKANILSDA ARMLGQLRDE  120
AEKLKESNEK LRETIKDLKA EKNELRDEKV SLKAEKERLE QQVKVMSVAP AGFLPHLPHP  180
TAFHPAAFTP FAHPHQAQAN KSAPVPTAFP GMAMWQWMPP AVVDTTQDPK LWPPNA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008676877.11e-126PREDICTED: uncharacterized protein LOC100274393 isoform X1
SwissprotQ9FH374e-61ILR3_ARATH; Transcription factor ILR3
TrEMBLA0A0A9LI901e-128A0A0A9LI90_ARUDO; Uncharacterized protein
STRINGSb04g001200.11e-127(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP81733646
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.12e-56bHLH family protein